Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm6517-201ENSMUST00000121056 511 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm15258-201ENSMUST00000153801 741 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm22662-201ENSMUST00000175290 256 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm43547-201ENSMUST00000197729 328 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup98Q6PFD9 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Gm22876-201ENSMUST00000175450 298 ntBASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.83□□□□□ -0.35
Nup98Q6PFD9 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nup98Q6PFD9 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Gm15554-201ENSMUST00000120406 913 ntBASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Gm5395-201ENSMUST00000121650 915 ntBASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.83□□□□□ -0.36
Nup98Q6PFD9 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup98Q6PFD9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Gm24470-201ENSMUST00000104486 132 ntBASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Gm12028-201ENSMUST00000118065 436 ntBASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Gm7765-201ENSMUST00000182585 974 ntBASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Mir6953-201ENSMUST00000184745 68 ntBASIC12.82□□□□□ -0.36
Nup98Q6PFD9 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Gm45363-201ENSMUST00000210196 1294 ntBASIC12.82□□□□□ -0.36
Nup98Q6PFD9 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.82□□□□□ -0.36
Nup98Q6PFD9 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms