Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clcn1Q64347 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm15519-201ENSMUST00000120088 1566 ntBASIC14.18□□□□□ -0.14
Clcn1Q64347 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm15136-201ENSMUST00000120552 533 ntBASIC14.18□□□□□ -0.14
Clcn1Q64347 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clcn1Q64347 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clcn1Q64347 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.18□□□□□ -0.14
Clcn1Q64347 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clcn1Q64347 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clcn1Q64347 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clcn1Q64347 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clcn1Q64347 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm29288-201ENSMUST00000191582 901 ntBASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm20781-201ENSMUST00000193154 693 ntBASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm21736-201ENSMUST00000195399 693 ntBASIC14.18□□□□□ -0.14
Clcn1Q64347 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm43969-201ENSMUST00000204833 535 ntBASIC14.18□□□□□ -0.14
Clcn1Q64347 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clcn1Q64347 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clcn1Q64347 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Clcn1Q64347 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm23612-201ENSMUST00000103823 110 ntBASIC14.17□□□□□ -0.14
Clcn1Q64347 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm11993-201ENSMUST00000121861 820 ntBASIC14.17□□□□□ -0.14
Clcn1Q64347 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.17□□□□□ -0.14
Clcn1Q64347 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm19246-201ENSMUST00000173599 255 ntBASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm23576-201ENSMUST00000179918 110 ntBASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC14.17□□□□□ -0.14
Clcn1Q64347 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC14.17□□□□□ -0.14
Clcn1Q64347 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC14.17□□□□□ -0.14
Clcn1Q64347 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.17□□□□□ -0.14
Clcn1Q64347 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clcn1Q64347 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.17□□□□□ -0.14
Clcn1Q64347 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.17□□□□□ -0.14
Clcn1Q64347 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.17□□□□□ -0.14
Clcn1Q64347 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms