Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Syne3Q4FZC9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Syne3Q4FZC9 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Syne3Q4FZC9 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Syne3Q4FZC9 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Syne3Q4FZC9 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Syne3Q4FZC9 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Syne3Q4FZC9 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Syne3Q4FZC9 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Syne3Q4FZC9 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm8111-201ENSMUST00000117659 987 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm27910-201ENSMUST00000185004 107 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm3508-201ENSMUST00000186012 792 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm5468-202ENSMUST00000227851 682 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm10179-201ENSMUST00000086233 688 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Syne3Q4FZC9 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm25076-201ENSMUST00000104098 132 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm14942-201ENSMUST00000119642 336 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm12029-201ENSMUST00000120073 832 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm23771-201ENSMUST00000178702 110 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm44980-201ENSMUST00000205826 314 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm45550-201ENSMUST00000209380 946 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms