Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 AC090962.2-201ENSMUST00000225064 1801 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b2Q3UJB0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 AC122291.1-201ENSMUST00000228937 5748 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Snord17-201ENSMUST00000104526 238 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm11544-201ENSMUST00000120215 382 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm14633-201ENSMUST00000121152 470 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm38135-201ENSMUST00000195068 502 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm8615-201ENSMUST00000025307 771 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm8618-201ENSMUST00000097570 432 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm44573-201ENSMUST00000191753 2370 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b2Q3UJB0 Gm13456-201ENSMUST00000118928 1365 ntBASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm5764-201ENSMUST00000118817 885 ntBASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Mir1893-201ENSMUST00000122565 83 ntBASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm26379-201ENSMUST00000178125 138 ntBASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Mir6396-201ENSMUST00000183603 111 ntBASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm29164-201ENSMUST00000185454 1024 ntBASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Gm7642-201ENSMUST00000216345 1809 ntBASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.34□□□□□ -0.11
Sf3b2Q3UJB0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms