Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col19a1Q0VF58 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Col19a1Q0VF58 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col19a1Q0VF58 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col19a1Q0VF58 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col19a1Q0VF58 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col19a1Q0VF58 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col19a1Q0VF58 Erich3-203ENSMUST00000189969 3460 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm22751-201ENSMUST00000102077 109 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Mir692-3-201ENSMUST00000102079 109 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Mir692-2-201ENSMUST00000102081 109 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm15132-201ENSMUST00000118581 652 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm14153-201ENSMUST00000119923 1139 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm18443-201ENSMUST00000185358 556 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm9523-201ENSMUST00000199146 1159 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 CT009754.4-201ENSMUST00000221430 565 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm15599-201ENSMUST00000122283 1345 ntBASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col19a1Q0VF58 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gm17147-201ENSMUST00000164176 432 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Platr10-202ENSMUST00000191479 818 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gm37944-201ENSMUST00000194233 414 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Gm8796-201ENSMUST00000219122 936 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col19a1Q0VF58 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms