Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.57□□□□□ -0.4
GabpaQ00422 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
GabpaQ00422 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
GabpaQ00422 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
GabpaQ00422 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
GabpaQ00422 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.57□□□□□ -0.4
GabpaQ00422 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
GabpaQ00422 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.56□□□□□ -0.4
GabpaQ00422 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
GabpaQ00422 Gm7541-201ENSMUST00000118361 535 ntBASIC12.56□□□□□ -0.4
GabpaQ00422 Gm11475-201ENSMUST00000118482 476 ntBASIC12.56□□□□□ -0.4
GabpaQ00422 Gm11993-201ENSMUST00000121861 820 ntBASIC12.56□□□□□ -0.4
GabpaQ00422 Gm25545-201ENSMUST00000122673 323 ntBASIC12.56□□□□□ -0.4
GabpaQ00422 Gm16547-201ENSMUST00000159474 293 ntBASIC12.56□□□□□ -0.4
GabpaQ00422 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.56□□□□□ -0.4
GabpaQ00422 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
GabpaQ00422 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.56□□□□□ -0.4
GabpaQ00422 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.56□□□□□ -0.4
GabpaQ00422 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Gm5449-201ENSMUST00000081132 357 ntBASIC12.56□□□□□ -0.4
GabpaQ00422 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
GabpaQ00422 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
GabpaQ00422 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
GabpaQ00422 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.56□□□□□ -0.4
GabpaQ00422 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.56□□□□□ -0.4
GabpaQ00422 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
GabpaQ00422 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.56□□□□□ -0.4
GabpaQ00422 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
GabpaQ00422 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
GabpaQ00422 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
GabpaQ00422 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
GabpaQ00422 Mir1893-201ENSMUST00000122565 83 ntBASIC12.55□□□□□ -0.4
GabpaQ00422 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Gm25569-201ENSMUST00000157175 131 ntBASIC12.55□□□□□ -0.4
GabpaQ00422 Gm9507-202ENSMUST00000180157 654 ntBASIC12.55□□□□□ -0.4
GabpaQ00422 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Gm6677-201ENSMUST00000195100 441 ntBASIC12.55□□□□□ -0.4
GabpaQ00422 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.55□□□□□ -0.4
GabpaQ00422 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.55□□□□□ -0.4
GabpaQ00422 Gm45258-201ENSMUST00000210042 853 ntBASIC12.55□□□□□ -0.4
GabpaQ00422 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
GabpaQ00422 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 BC106175-202ENSMUST00000219344 1213 ntBASIC12.55□□□□□ -0.4
GabpaQ00422 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.55□□□□□ -0.4
GabpaQ00422 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
GabpaQ00422 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.55□□□□□ -0.4
GabpaQ00422 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
GabpaQ00422 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms