Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm4705-201ENSMUST00000177415 354 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm27444-201ENSMUST00000184157 137 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm43811-201ENSMUST00000202862 695 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm33080-201ENSMUST00000205429 172 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 AC134913.2-201ENSMUST00000225017 771 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 AC103672.1-201ENSMUST00000227502 365 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm19027-201ENSMUST00000187291 1355 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Smarcc1P97496 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Smarcc1P97496 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Smarcc1P97496 Erich3-203ENSMUST00000189969 3460 ntBASIC13.89□□□□□ -0.19
Smarcc1P97496 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Smarcc1P97496 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Gm24140-201ENSMUST00000122773 326 ntBASIC13.89□□□□□ -0.19
Smarcc1P97496 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 AC241616.1-201ENSMUST00000213741 166 ntBASIC13.89□□□□□ -0.19
Smarcc1P97496 AC101205.2-201ENSMUST00000226206 715 ntBASIC13.89□□□□□ -0.19
Smarcc1P97496 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.89□□□□□ -0.19
Smarcc1P97496 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.89□□□□□ -0.19
Smarcc1P97496 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcc1P97496 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC13.88□□□□□ -0.19
Smarcc1P97496 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC13.88□□□□□ -0.19
Smarcc1P97496 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC13.88□□□□□ -0.19
Smarcc1P97496 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC13.88□□□□□ -0.19
Smarcc1P97496 Gm28671-201ENSMUST00000187036 692 ntBASIC13.88□□□□□ -0.19
Smarcc1P97496 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Smarcc1P97496 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Gm9644-201ENSMUST00000212828 1183 ntBASIC13.88□□□□□ -0.19
Smarcc1P97496 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Gm5278-201ENSMUST00000055957 552 ntBASIC13.88□□□□□ -0.19
Smarcc1P97496 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Smarcc1P97496 Gm25514-201ENSMUST00000083860 135 ntBASIC13.88□□□□□ -0.19
Smarcc1P97496 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcc1P97496 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcc1P97496 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms