Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cacna1aP97445 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cacna1aP97445 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Gm5976-201ENSMUST00000180794 996 ntBASIC10.29□□□□□ -0.76
Cacna1aP97445 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.29□□□□□ -0.76
Cacna1aP97445 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.29□□□□□ -0.76
Cacna1aP97445 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Cacna1aP97445 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cacna1aP97445 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cacna1aP97445 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cacna1aP97445 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC10.28□□□□□ -0.76
Cacna1aP97445 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.28□□□□□ -0.76
Cacna1aP97445 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm21577-201ENSMUST00000190823 697 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm20802-201ENSMUST00000190832 698 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm37723-201ENSMUST00000194480 565 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC10.28□□□□□ -0.76
Cacna1aP97445 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Cacna1aP97445 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm11473-201ENSMUST00000118980 359 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm5808-201ENSMUST00000178090 357 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm43117-201ENSMUST00000198531 379 ntBASIC10.28□□□□□ -0.76
Cacna1aP97445 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.28□□□□□ -0.76
Cacna1aP97445 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cacna1aP97445 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.27□□□□□ -0.76
Cacna1aP97445 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Cacna1aP97445 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cacna1aP97445 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cacna1aP97445 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cacna1aP97445 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.27□□□□□ -0.76
Cacna1aP97445 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cacna1aP97445 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.27□□□□□ -0.76
Cacna1aP97445 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cacna1aP97445 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Cacna1aP97445 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Krtap6-3-201ENSMUST00000079151 444 ntBASIC10.27□□□□□ -0.77
Cacna1aP97445 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms