Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-3P97334 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-3P97334 Gm17836-201ENSMUST00000191976 1302 ntBASIC13.9□□□□□ -0.19
Nkx2-3P97334 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-3P97334 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.9□□□□□ -0.19
Nkx2-3P97334 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm6612-201ENSMUST00000170777 395 ntBASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm43752-201ENSMUST00000198475 697 ntBASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm40332-201ENSMUST00000199847 938 ntBASIC13.89□□□□□ -0.19
Nkx2-3P97334 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-3P97334 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-3P97334 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm16209-201ENSMUST00000118457 627 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm12849-201ENSMUST00000120013 739 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm11544-201ENSMUST00000120215 382 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm14126-201ENSMUST00000122345 395 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm10171-201ENSMUST00000126220 628 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm3527-201ENSMUST00000198905 460 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm5302-201ENSMUST00000202130 796 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-3P97334 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Gm10233-201ENSMUST00000089275 628 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-3P97334 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nkx2-3P97334 AC107452.3-201ENSMUST00000228807 1308 ntBASIC13.88□□□□□ -0.19
Nkx2-3P97334 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-3P97334 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 AC124732.3-201ENSMUST00000221835 1765 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Gm23255-201ENSMUST00000102244 110 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Gm15968-201ENSMUST00000119342 1168 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-3P97334 Gm23757-201ENSMUST00000158353 100 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Gm24346-201ENSMUST00000158712 194 ntBASIC13.87□□□□□ -0.19
Nkx2-3P97334 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms