Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Gm5302-201ENSMUST00000202130 796 ntBASIC8.95□□□□□ -0.98
Lmo4P61969 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC8.95□□□□□ -0.98
Lmo4P61969 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Lmo4P61969 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
Lmo4P61969 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Lmo4P61969 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC8.95□□□□□ -0.98
Lmo4P61969 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Lmo4P61969 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Lmo4P61969 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC8.94□□□□□ -0.98
Lmo4P61969 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm42858-201ENSMUST00000202512 1704 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Lmo4P61969 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Lmo4P61969 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Lmo4P61969 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Lmo4P61969 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm45743-201ENSMUST00000212701 2795 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm43931-201ENSMUST00000204817 2870 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC8.94□□□□□ -0.98
Lmo4P61969 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm8659-201ENSMUST00000120024 1084 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm12906-201ENSMUST00000154610 441 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Gm9625-201ENSMUST00000180422 955 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Ighv5-8-202ENSMUST00000191967 337 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm7939-201ENSMUST00000201233 1050 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 BC080696-201ENSMUST00000202858 1218 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm19640-201ENSMUST00000214849 464 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Gm40879-201ENSMUST00000220759 612 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 AC174797.2-201ENSMUST00000225835 165 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 AC158986.2-201ENSMUST00000227487 618 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm12912-201ENSMUST00000121596 1381 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Lmo4P61969 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Lmo4P61969 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm43167-201ENSMUST00000202001 1606 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC8.94□□□□□ -0.98
Lmo4P61969 Gm43482-201ENSMUST00000202797 1861 ntBASIC8.94□□□□□ -0.98
Lmo4P61969 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC8.93□□□□□ -0.98
Lmo4P61969 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 AC164107.1-201ENSMUST00000227730 2161 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Lmo4P61969 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Lmo4P61969 Gm43051-201ENSMUST00000201096 2678 ntBASIC8.93□□□□□ -0.98
Lmo4P61969 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Lmo4P61969 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms