Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC10.48□□□□□ -0.73
Nup43P59235 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.48□□□□□ -0.73
Nup43P59235 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Snord55-201ENSMUST00000174939 79 ntBASIC10.48□□□□□ -0.73
Nup43P59235 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nup43P59235 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Gm28388-201ENSMUST00000186262 437 ntBASIC10.48□□□□□ -0.73
Nup43P59235 Gm5244-202ENSMUST00000189517 743 ntBASIC10.48□□□□□ -0.73
Nup43P59235 Gm42816-201ENSMUST00000198433 325 ntBASIC10.48□□□□□ -0.73
Nup43P59235 Gm43380-201ENSMUST00000200421 220 ntBASIC10.48□□□□□ -0.73
Nup43P59235 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.48□□□□□ -0.73
Nup43P59235 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.48□□□□□ -0.73
Nup43P59235 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.48□□□□□ -0.73
Nup43P59235 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
Nup43P59235 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Gm9111-201ENSMUST00000219394 709 ntBASIC10.48□□□□□ -0.73
Nup43P59235 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.48□□□□□ -0.73
Nup43P59235 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.48□□□□□ -0.73
Nup43P59235 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.48□□□□□ -0.73
Nup43P59235 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Nup43P59235 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Nup43P59235 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Nup43P59235 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nup43P59235 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.47□□□□□ -0.73
Nup43P59235 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Nup43P59235 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.47□□□□□ -0.73
Nup43P59235 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.47□□□□□ -0.73
Nup43P59235 Gm25554-201ENSMUST00000158075 113 ntBASIC10.47□□□□□ -0.73
Nup43P59235 Gm24074-201ENSMUST00000158178 260 ntBASIC10.47□□□□□ -0.73
Nup43P59235 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
Nup43P59235 Gm8531-201ENSMUST00000188319 893 ntBASIC10.47□□□□□ -0.73
Nup43P59235 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.47□□□□□ -0.73
Nup43P59235 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.47□□□□□ -0.73
Nup43P59235 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nup43P59235 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nup43P59235 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nup43P59235 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Nup43P59235 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nup43P59235 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Nup43P59235 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.46□□□□□ -0.73
Nup43P59235 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Nup43P59235 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.46□□□□□ -0.73
Nup43P59235 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
Nup43P59235 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nup43P59235 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Nup43P59235 Gm14592-201ENSMUST00000117201 560 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms