Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.32□□□□□ -0.44
Tpm1P58771 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.32□□□□□ -0.44
Tpm1P58771 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tpm1P58771 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm27516-201ENSMUST00000184237 98 ntBASIC12.32□□□□□ -0.44
Tpm1P58771 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tpm1P58771 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tpm1P58771 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tpm1P58771 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.32□□□□□ -0.44
Tpm1P58771 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.32□□□□□ -0.44
Tpm1P58771 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.32□□□□□ -0.44
Tpm1P58771 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tpm1P58771 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC12.31□□□□□ -0.44
Tpm1P58771 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tpm1P58771 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tpm1P58771 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.31□□□□□ -0.44
Tpm1P58771 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.31□□□□□ -0.44
Tpm1P58771 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.31□□□□□ -0.44
Tpm1P58771 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Gm26361-201ENSMUST00000158868 186 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tpm1P58771 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Olfml3-204ENSMUST00000169286 874 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Tpm1P58771 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.31□□□□□ -0.44
Tpm1P58771 Gm3332-201ENSMUST00000189337 928 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Gm38317-201ENSMUST00000195564 343 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.31□□□□□ -0.44
Tpm1P58771 Gm45865-201ENSMUST00000211815 945 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.31□□□□□ -0.44
Tpm1P58771 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Gm18165-201ENSMUST00000217426 928 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Cts7-204ENSMUST00000225321 1257 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Tpm1P58771 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tpm1P58771 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tpm1P58771 AA474408-201ENSMUST00000098110 3339 ntBASIC12.31□□□□□ -0.44
Tpm1P58771 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Tpm1P58771 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tpm1P58771 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tpm1P58771 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.3□□□□□ -0.44
Tpm1P58771 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms