Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Sox1P53783 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sox1P53783 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox1P53783 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sox1P53783 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC11.37□□□□□ -0.59
Sox1P53783 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC11.37□□□□□ -0.59
Sox1P53783 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC11.37□□□□□ -0.59
Sox1P53783 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Sox1P53783 Gm22616-201ENSMUST00000179783 100 ntBASIC11.37□□□□□ -0.59
Sox1P53783 Gm5205-201ENSMUST00000182253 1003 ntBASIC11.37□□□□□ -0.59
Sox1P53783 Gm5244-202ENSMUST00000189517 743 ntBASIC11.37□□□□□ -0.59
Sox1P53783 Gm9273-201ENSMUST00000200606 715 ntBASIC11.37□□□□□ -0.59
Sox1P53783 Gm45225-201ENSMUST00000206852 1139 ntBASIC11.37□□□□□ -0.59
Sox1P53783 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC11.37□□□□□ -0.59
Sox1P53783 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 AC165260.3-201ENSMUST00000225101 665 ntBASIC11.37□□□□□ -0.59
Sox1P53783 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sox1P53783 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox1P53783 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Gm42651-201ENSMUST00000199851 1339 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Klf10-203ENSMUST00000227920 2144 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Gm11919-201ENSMUST00000117609 721 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Gm6881-201ENSMUST00000121811 833 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Gm16288-201ENSMUST00000137940 367 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox1P53783 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Gm9574-201ENSMUST00000173127 845 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Mir8111-201ENSMUST00000184463 137 ntBASIC11.36□□□□□ -0.59
Sox1P53783 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC11.36□□□□□ -0.59
Sox1P53783 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox1P53783 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 130.6 ms