Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Pdx1P52946 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pdx1P52946 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pdx1P52946 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pdx1P52946 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.93□□□□□ -0.66
Pdx1P52946 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pdx1P52946 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm12516-201ENSMUST00000120819 385 ntBASIC10.93□□□□□ -0.66
Pdx1P52946 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.93□□□□□ -0.66
Pdx1P52946 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm6407-201ENSMUST00000176468 549 ntBASIC10.93□□□□□ -0.66
Pdx1P52946 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.93□□□□□ -0.66
Pdx1P52946 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm42816-201ENSMUST00000198433 325 ntBASIC10.93□□□□□ -0.66
Pdx1P52946 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm44551-201ENSMUST00000208804 171 ntBASIC10.93□□□□□ -0.66
Pdx1P52946 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.93□□□□□ -0.66
Pdx1P52946 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.93□□□□□ -0.66
Pdx1P52946 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pdx1P52946 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pdx1P52946 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
Pdx1P52946 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pdx1P52946 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pdx1P52946 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pdx1P52946 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pdx1P52946 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pdx1P52946 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.92□□□□□ -0.66
Pdx1P52946 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.92□□□□□ -0.66
Pdx1P52946 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.92□□□□□ -0.66
Pdx1P52946 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pdx1P52946 Gm12663-201ENSMUST00000118481 958 ntBASIC10.92□□□□□ -0.66
Pdx1P52946 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.92□□□□□ -0.66
Pdx1P52946 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Gm24074-201ENSMUST00000158178 260 ntBASIC10.92□□□□□ -0.66
Pdx1P52946 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pdx1P52946 Mir6407-201ENSMUST00000184510 101 ntBASIC10.92□□□□□ -0.66
Pdx1P52946 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.92□□□□□ -0.66
Pdx1P52946 Gm45594-201ENSMUST00000211717 241 ntBASIC10.92□□□□□ -0.66
Pdx1P52946 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.92□□□□□ -0.66
Pdx1P52946 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.92□□□□□ -0.66
Pdx1P52946 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.92□□□□□ -0.66
Pdx1P52946 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.92□□□□□ -0.66
Pdx1P52946 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pdx1P52946 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 203.1 ms