Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm20493-201ENSMUST00000173706 213 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm5808-201ENSMUST00000178090 357 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm7928-201ENSMUST00000181249 701 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm5254-201ENSMUST00000188353 977 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm9353-201ENSMUST00000200472 604 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm44640-201ENSMUST00000206894 247 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm45258-201ENSMUST00000210042 853 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm10233-201ENSMUST00000089275 628 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Sftpa1P35242 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Sftpa1P35242 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sftpa1P35242 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.26□□□□□ -0.77
Sftpa1P35242 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 AC166361.2-201ENSMUST00000219269 1415 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sftpa1P35242 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sftpa1P35242 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.26□□□□□ -0.77
Sftpa1P35242 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.26□□□□□ -0.77
Sftpa1P35242 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC10.26□□□□□ -0.77
Sftpa1P35242 Gm23582-201ENSMUST00000158530 139 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 Gm18014-201ENSMUST00000183369 817 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.26□□□□□ -0.77
Sftpa1P35242 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.26□□□□□ -0.77
Sftpa1P35242 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Sftpa1P35242 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.26□□□□□ -0.77
Sftpa1P35242 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.26□□□□□ -0.77
Sftpa1P35242 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sftpa1P35242 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Sftpa1P35242 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.25□□□□□ -0.77
Sftpa1P35242 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.25□□□□□ -0.77
Sftpa1P35242 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.25□□□□□ -0.77
Sftpa1P35242 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sftpa1P35242 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sftpa1P35242 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sftpa1P35242 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Sftpa1P35242 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms