Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Gm11930-201ENSMUST00000117788 190 ntBASIC10.13□□□□□ -0.79
Nedd8P29595 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.13□□□□□ -0.79
Nedd8P29595 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.13□□□□□ -0.79
Nedd8P29595 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.13□□□□□ -0.79
Nedd8P29595 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Gm24074-201ENSMUST00000158178 260 ntBASIC10.13□□□□□ -0.79
Nedd8P29595 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.13□□□□□ -0.79
Nedd8P29595 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.13□□□□□ -0.79
Nedd8P29595 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Gm38117-201ENSMUST00000194653 939 ntBASIC10.13□□□□□ -0.79
Nedd8P29595 Gm43118-201ENSMUST00000199149 775 ntBASIC10.13□□□□□ -0.79
Nedd8P29595 Gm42859-201ENSMUST00000199572 193 ntBASIC10.13□□□□□ -0.79
Nedd8P29595 Gm5302-201ENSMUST00000202130 796 ntBASIC10.13□□□□□ -0.79
Nedd8P29595 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Nedd8P29595 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Nedd8P29595 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nedd8P29595 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC10.13□□□□□ -0.79
Nedd8P29595 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nedd8P29595 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Nedd8P29595 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nedd8P29595 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Nedd8P29595 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC10.13□□□□□ -0.79
Nedd8P29595 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC10.12□□□□□ -0.79
Nedd8P29595 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nedd8P29595 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.12□□□□□ -0.79
Nedd8P29595 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 AC153498.1-201ENSMUST00000219775 2722 ntBASIC10.12□□□□□ -0.79
Nedd8P29595 Gm37975-201ENSMUST00000195494 2099 ntBASIC10.12□□□□□ -0.79
Nedd8P29595 Gm14644-201ENSMUST00000116671 647 ntBASIC10.12□□□□□ -0.79
Nedd8P29595 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Nedd8P29595 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.12□□□□□ -0.79
Nedd8P29595 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.12□□□□□ -0.79
Nedd8P29595 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Gm43818-201ENSMUST00000200605 466 ntBASIC10.12□□□□□ -0.79
Nedd8P29595 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nedd8P29595 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nedd8P29595 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nedd8P29595 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nedd8P29595 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC10.12□□□□□ -0.79
Nedd8P29595 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.12□□□□□ -0.79
Nedd8P29595 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC10.12□□□□□ -0.79
Nedd8P29595 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC10.12□□□□□ -0.79
Nedd8P29595 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nedd8P29595 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nedd8P29595 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nedd8P29595 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Gm42741-201ENSMUST00000201340 2278 ntBASIC10.12□□□□□ -0.79
Nedd8P29595 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nedd8P29595 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nedd8P29595 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nedd8P29595 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nedd8P29595 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Nedd8P29595 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Nedd8P29595 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nedd8P29595 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm10434-201ENSMUST00000101158 471 ntBASIC10.11□□□□□ -0.79
Nedd8P29595 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nedd8P29595 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms