Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm7255-201ENSMUST00000187371 908 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm37197-201ENSMUST00000195607 401 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Vcam1P29533 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vcam1P29533 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vcam1P29533 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vcam1P29533 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vcam1P29533 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vcam1P29533 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vcam1P29533 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vcam1P29533 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vcam1P29533 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Vcam1P29533 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Vcam1P29533 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Pck2-205ENSMUST00000226352 2784 ntBASIC12.69□□□□□ -0.38
Vcam1P29533 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Vcam1P29533 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Gm13827-201ENSMUST00000148801 372 ntBASIC12.69□□□□□ -0.38
Vcam1P29533 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.69□□□□□ -0.38
Vcam1P29533 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.69□□□□□ -0.38
Vcam1P29533 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.69□□□□□ -0.38
Vcam1P29533 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.69□□□□□ -0.38
Vcam1P29533 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Vcam1P29533 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Vcam1P29533 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Vcam1P29533 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.69□□□□□ -0.38
Vcam1P29533 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcam1P29533 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.69□□□□□ -0.38
Vcam1P29533 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vcam1P29533 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.68□□□□□ -0.38
Vcam1P29533 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.68□□□□□ -0.38
Vcam1P29533 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.68□□□□□ -0.38
Vcam1P29533 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.68□□□□□ -0.38
Vcam1P29533 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.68□□□□□ -0.38
Vcam1P29533 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.68□□□□□ -0.38
Vcam1P29533 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Vcam1P29533 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.68□□□□□ -0.38
Vcam1P29533 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vcam1P29533 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcam1P29533 Gm10580-201ENSMUST00000097985 396 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms