Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Gm16380-201ENSMUST00000077997 478 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Pde6aP27664 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pde6aP27664 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.82□□□□□ -0.36
Pde6aP27664 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pde6aP27664 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pde6aP27664 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.81□□□□□ -0.36
Pde6aP27664 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Pde6aP27664 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.81□□□□□ -0.36
Pde6aP27664 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pde6aP27664 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pde6aP27664 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.81□□□□□ -0.36
Pde6aP27664 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm14497-201ENSMUST00000119537 580 ntBASIC12.81□□□□□ -0.36
Pde6aP27664 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.81□□□□□ -0.36
Pde6aP27664 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm18042-201ENSMUST00000219887 790 ntBASIC12.81□□□□□ -0.36
Pde6aP27664 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Pde6aP27664 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.81□□□□□ -0.36
Pde6aP27664 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.81□□□□□ -0.36
Pde6aP27664 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pde6aP27664 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.81□□□□□ -0.36
Pde6aP27664 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Pde6aP27664 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.81□□□□□ -0.36
Pde6aP27664 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6aP27664 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pde6aP27664 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.81□□□□□ -0.36
Pde6aP27664 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pde6aP27664 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pde6aP27664 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.8□□□□□ -0.36
Pde6aP27664 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.8□□□□□ -0.36
Pde6aP27664 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.8□□□□□ -0.36
Pde6aP27664 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Gm16030-201ENSMUST00000159098 603 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.8□□□□□ -0.36
Pde6aP27664 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 Gm7255-201ENSMUST00000187371 908 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 Gm6677-201ENSMUST00000195100 441 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.8□□□□□ -0.36
Pde6aP27664 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.8□□□□□ -0.36
Pde6aP27664 Gm18968-201ENSMUST00000221319 862 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pde6aP27664 Gm25125-201ENSMUST00000083340 136 ntBASIC12.8□□□□□ -0.36
Pde6aP27664 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6aP27664 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms