Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm13549-201ENSMUST00000118339 796 ntBASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm12663-201ENSMUST00000118481 958 ntBASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.43□□□□□ -0.58
Nfkb1P25799 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm22146-201ENSMUST00000157397 288 ntBASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Snord55-201ENSMUST00000174939 79 ntBASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm24809-201ENSMUST00000175318 271 ntBASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm42660-201ENSMUST00000197733 947 ntBASIC11.43□□□□□ -0.58
Nfkb1P25799 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.43□□□□□ -0.58
Nfkb1P25799 Capsl-202ENSMUST00000226688 739 ntBASIC11.43□□□□□ -0.58
Nfkb1P25799 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Nfkb1P25799 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nfkb1P25799 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nfkb1P25799 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nfkb1P25799 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nfkb1P25799 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm25562-201ENSMUST00000104608 133 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nfkb1P25799 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm12986-201ENSMUST00000119037 967 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm12783-201ENSMUST00000121425 397 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm25951-201ENSMUST00000175330 64 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm6390-201ENSMUST00000215034 589 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm8181-201ENSMUST00000062242 669 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Nfkb1P25799 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.42□□□□□ -0.58
Nfkb1P25799 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.42□□□□□ -0.58
Nfkb1P25799 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nfkb1P25799 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nfkb1P25799 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nfkb1P25799 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 Gm24791-201ENSMUST00000104284 131 ntBASIC11.41□□□□□ -0.58
Nfkb1P25799 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms