Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxd8P23463 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.56□□□□□ -0.56
Hoxd8P23463 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.56□□□□□ -0.56
Hoxd8P23463 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.56□□□□□ -0.56
Hoxd8P23463 Gm9440-201ENSMUST00000119667 539 ntBASIC11.56□□□□□ -0.56
Hoxd8P23463 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Hoxd8P23463 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.56□□□□□ -0.56
Hoxd8P23463 Gm27956-201ENSMUST00000175604 260 ntBASIC11.56□□□□□ -0.56
Hoxd8P23463 Gm27440-201ENSMUST00000184785 107 ntBASIC11.56□□□□□ -0.56
Hoxd8P23463 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.56□□□□□ -0.56
Hoxd8P23463 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Hoxd8P23463 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.56□□□□□ -0.56
Hoxd8P23463 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.56□□□□□ -0.56
Hoxd8P23463 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.56□□□□□ -0.56
Hoxd8P23463 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.56□□□□□ -0.56
Hoxd8P23463 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxd8P23463 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxd8P23463 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm14113-201ENSMUST00000121399 976 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm22588-201ENSMUST00000157510 140 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Hoxd8P23463 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm24312-201ENSMUST00000178677 119 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm37723-201ENSMUST00000194480 565 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm40414-201ENSMUST00000197608 481 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm18042-201ENSMUST00000219887 790 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 AC158388.1-201ENSMUST00000225441 256 ntBASIC11.55□□□□□ -0.56
Hoxd8P23463 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Hoxd8P23463 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxd8P23463 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxd8P23463 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxd8P23463 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxd8P23463 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxd8P23463 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms