Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC8.99□□□□□ -0.97
Cdx1P18111 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Gm37962-201ENSMUST00000195535 2034 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cdx1P18111 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Gm12314-201ENSMUST00000118104 538 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC8.99□□□□□ -0.97
Cdx1P18111 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Gm24845-201ENSMUST00000158034 109 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Gm17812-201ENSMUST00000204935 318 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 AC158777.1-201ENSMUST00000226216 1724 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Cdx1P18111 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cdx1P18111 Gm44103-201ENSMUST00000204364 3662 ntBASIC8.99□□□□□ -0.97
Cdx1P18111 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cdx1P18111 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC8.98□□□□□ -0.97
Cdx1P18111 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cdx1P18111 Gm43823-201ENSMUST00000197391 1808 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Gm38357-201ENSMUST00000195382 2464 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Gm42460-201ENSMUST00000198863 2567 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 AC154220.1-201ENSMUST00000225033 1705 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Cdx1P18111 Gm23200-201ENSMUST00000104379 132 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC8.98□□□□□ -0.97
Cdx1P18111 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Cdx1P18111 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC8.98□□□□□ -0.97
Cdx1P18111 Gm24749-201ENSMUST00000157838 343 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC8.98□□□□□ -0.97
Cdx1P18111 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cdx1P18111 Gm24514-201ENSMUST00000174961 285 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Gm8546-201ENSMUST00000178288 1264 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC8.98□□□□□ -0.97
Cdx1P18111 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 AC154680.1-201ENSMUST00000224376 859 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Gm43242-201ENSMUST00000199507 1776 ntBASIC8.98□□□□□ -0.97
Cdx1P18111 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Cdx1P18111 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC8.98□□□□□ -0.97
Cdx1P18111 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cdx1P18111 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms