Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
UbbP0CG49 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm15711-201ENSMUST00000118889 535 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Gm12196-201ENSMUST00000120954 262 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm25890-201ENSMUST00000177643 165 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Gm22614-201ENSMUST00000178300 165 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
UbbP0CG49 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.63□□□□□ -0.87
UbbP0CG49 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
UbbP0CG49 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.63□□□□□ -0.87
UbbP0CG49 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm22042-201ENSMUST00000082989 165 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Gm26110-201ENSMUST00000083971 165 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.63□□□□□ -0.87
UbbP0CG49 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
UbbP0CG49 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.63□□□□□ -0.87
UbbP0CG49 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
UbbP0CG49 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
UbbP0CG49 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.62□□□□□ -0.87
UbbP0CG49 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
UbbP0CG49 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm13916-201ENSMUST00000117368 628 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Gm12380-201ENSMUST00000119012 544 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm18734-201ENSMUST00000172937 808 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Mir7085-201ENSMUST00000184353 66 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Mir8109-201ENSMUST00000184375 117 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Gm27320-201ENSMUST00000184892 109 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Gm29499-201ENSMUST00000189151 486 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm28329-201ENSMUST00000191208 689 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Gm29171-201ENSMUST00000191397 486 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.62□□□□□ -0.87
UbbP0CG49 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.62□□□□□ -0.87
UbbP0CG49 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm10288-201ENSMUST00000084614 537 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms