Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Gm5472-201ENSMUST00000178604 1678 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Hoxc9P09633 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.29□□□□□ -0.12
Hoxc9P09633 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxc9P09633 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC14.28□□□□□ -0.12
Hoxc9P09633 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm13171-201ENSMUST00000117233 391 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm13688-201ENSMUST00000121557 608 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm12950-201ENSMUST00000121683 417 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm13857-201ENSMUST00000139645 173 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm24074-201ENSMUST00000158178 260 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm23582-201ENSMUST00000158530 139 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm7765-201ENSMUST00000182585 974 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm45527-201ENSMUST00000211052 774 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm9619-201ENSMUST00000211587 762 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 AC107752.1-201ENSMUST00000219362 469 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxc9P09633 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm10238-201ENSMUST00000089689 408 ntBASIC14.28□□□□□ -0.12
Hoxc9P09633 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxc9P09633 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc9P09633 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hoxc9P09633 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.27□□□□□ -0.12
Hoxc9P09633 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc9P09633 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.27□□□□□ -0.12
Hoxc9P09633 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc9P09633 Gm8873-201ENSMUST00000217847 1439 ntBASIC14.27□□□□□ -0.12
Hoxc9P09633 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc9P09633 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc9P09633 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Hoxc9P09633 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc9P09633 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm13326-201ENSMUST00000118730 1011 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm5335-201ENSMUST00000182995 1000 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm29543-201ENSMUST00000188138 967 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm38349-201ENSMUST00000195732 462 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm9644-201ENSMUST00000212828 1183 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hoxc9P09633 AC129217.1-201ENSMUST00000225181 642 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 CT009713.2-201ENSMUST00000225532 1149 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc9P09633 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc9P09633 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm45206-201ENSMUST00000206885 2285 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc9P09633 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc9P09633 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc9P09633 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc9P09633 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Hoxc9P09633 Gm38312-201ENSMUST00000195426 1746 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC14.27□□□□□ -0.13
Hoxc9P09633 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Hoxc9P09633 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC14.26□□□□□ -0.13
Hoxc9P09633 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc9P09633 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms