Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Gm25319-201ENSMUST00000122552 325 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm44420-201ENSMUST00000203669 490 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm4953-201ENSMUST00000077309 483 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Mir675-201ENSMUST00000102320 84 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm25288-201ENSMUST00000122800 265 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm42617-201ENSMUST00000197640 1229 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm45893-201ENSMUST00000211899 247 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Gm28653-202ENSMUST00000227082 521 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 AC163646.3-202ENSMUST00000228685 691 ntBASIC8.83□□□□□ -1
Usp9yF8VPU6 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Usp9yF8VPU6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Usp9yF8VPU6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm42651-201ENSMUST00000199851 1339 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm7002-201ENSMUST00000221386 2165 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm12047-201ENSMUST00000117561 944 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm24597-201ENSMUST00000122503 300 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm23916-201ENSMUST00000158484 399 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm20474-201ENSMUST00000180089 596 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Ighv1-33-201ENSMUST00000193220 350 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC8.82□□□□□ -1
Usp9yF8VPU6 AC122459.4-201ENSMUST00000228654 551 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm9244-201ENSMUST00000056767 2129 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm43102-201ENSMUST00000201004 2324 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm16439-201ENSMUST00000100687 564 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC8.82□□□□□ -1
Usp9yF8VPU6 Gm9353-201ENSMUST00000200472 604 ntBASIC8.82□□□□□ -1
Usp9yF8VPU6 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms