Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.83□□□□□ -0.36
Clrn2B2RVW2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.83□□□□□ -0.36
Clrn2B2RVW2 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Rgr-203ENSMUST00000225070 4704 ntBASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gm15707-201ENSMUST00000118804 996 ntBASIC12.82□□□□□ -0.36
Clrn2B2RVW2 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gm7928-201ENSMUST00000181249 701 ntBASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gm44498-201ENSMUST00000199509 111 ntBASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.82□□□□□ -0.36
Clrn2B2RVW2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.82□□□□□ -0.36
Clrn2B2RVW2 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.82□□□□□ -0.36
Clrn2B2RVW2 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gm6564-201ENSMUST00000075377 619 ntBASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clrn2B2RVW2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Gm11919-201ENSMUST00000117609 721 ntBASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Gm25288-201ENSMUST00000122800 265 ntBASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Gm7572-201ENSMUST00000182616 766 ntBASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Gm42511-201ENSMUST00000196160 234 ntBASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clrn2B2RVW2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn2B2RVW2 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.8□□□□□ -0.36
Clrn2B2RVW2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn2B2RVW2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Clrn2B2RVW2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Clrn2B2RVW2 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms