Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm22920-201ENSMUST00000102175 109 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm16166-201ENSMUST00000118291 787 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm7666-201ENSMUST00000146631 819 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Olfml3-204ENSMUST00000169286 874 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Mir8115-201ENSMUST00000184992 119 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm9353-201ENSMUST00000200472 604 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm43852-201ENSMUST00000202098 917 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Thoc7-209ENSMUST00000225325 765 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a2Q9JLR1 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Gm14263-201ENSMUST00000117955 746 ntBASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Gm15549-201ENSMUST00000121595 622 ntBASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sec61a2Q9JLR1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms