Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Pde2a-212ENSMUST00000211368 3885 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gtf3c6Q9D8P7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm15352-201ENSMUST00000118696 270 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm9089-201ENSMUST00000122027 526 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm8574-201ENSMUST00000203207 924 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Gm44753-201ENSMUST00000207739 2335 ntTSL 5 BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gtf3c6Q9D8P7 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm18367-201ENSMUST00000176139 600 ntBASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm19087-201ENSMUST00000191430 946 ntBASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Atp4a-201ENSMUST00000005692 3485 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gtf3c6Q9D8P7 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms