Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm15782-201ENSMUST00000121073 445 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm11675-201ENSMUST00000121873 832 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Mir1905-201ENSMUST00000122779 82 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm26982-201ENSMUST00000182250 1151 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm42660-201ENSMUST00000197733 947 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 CT030166.5-201ENSMUST00000222249 420 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm43334-201ENSMUST00000197740 1318 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U2af1Q9D883 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
U2af1Q9D883 AC149588.2-201ENSMUST00000228182 1859 ntBASIC14.55□□□□□ -0.08
U2af1Q9D883 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm38055-201ENSMUST00000195353 2217 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm13445-201ENSMUST00000121664 307 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm8723-201ENSMUST00000166076 820 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm8701-201ENSMUST00000169259 874 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Platr10-202ENSMUST00000191479 818 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm18539-201ENSMUST00000204745 1090 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm2594-201ENSMUST00000214774 742 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Capsl-202ENSMUST00000226688 739 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm6641-201ENSMUST00000196100 1315 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Gm42815-201ENSMUST00000198787 1470 ntBASIC14.54□□□□□ -0.08
U2af1Q9D883 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U2af1Q9D883 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
U2af1Q9D883 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm5766-201ENSMUST00000160520 1977 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
U2af1Q9D883 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
U2af1Q9D883 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm11560-201ENSMUST00000117567 948 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.53□□□□□ -0.08
U2af1Q9D883 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm25830-201ENSMUST00000158923 132 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm19587-201ENSMUST00000191395 545 ntBASIC14.53□□□□□ -0.08
U2af1Q9D883 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC14.53□□□□□ -0.08
U2af1Q9D883 Gm5302-201ENSMUST00000202130 796 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms