Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.66□□□□□ -0.38
Trim11Q99PQ2 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.66□□□□□ -0.38
Trim11Q99PQ2 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.66□□□□□ -0.38
Trim11Q99PQ2 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim11Q99PQ2 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm14592-201ENSMUST00000117201 560 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm4726-201ENSMUST00000135604 736 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm6019-201ENSMUST00000148369 736 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm9555-201ENSMUST00000200908 583 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm17831-201ENSMUST00000205579 900 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim11Q99PQ2 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim11Q99PQ2 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trim11Q99PQ2 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim11Q99PQ2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms