Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Mir877-201ENSMUST00000104738 85 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm8731-201ENSMUST00000118088 412 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm11573-201ENSMUST00000119956 394 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm14277-201ENSMUST00000121195 360 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkd1Q99MH6 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm15515-201ENSMUST00000117827 822 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm14017-201ENSMUST00000121934 386 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm17040-202ENSMUST00000170597 889 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm5733-201ENSMUST00000190232 939 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm6905-201ENSMUST00000205729 511 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkd1Q99MH6 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms