Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Scrt1Q99M85 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Scrt1Q99M85 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Scrt1Q99M85 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.79□□□□□ -0.84
Scrt1Q99M85 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm12337-201ENSMUST00000119634 400 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm15982-201ENSMUST00000121681 554 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm17221-201ENSMUST00000163909 481 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm17073-201ENSMUST00000168069 556 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm5982-201ENSMUST00000196234 512 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm4978-201ENSMUST00000071565 801 ntBASIC9.78□□□□□ -0.84
Scrt1Q99M85 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.78□□□□□ -0.84
Scrt1Q99M85 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Scrt1Q99M85 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Scrt1Q99M85 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Scrt1Q99M85 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Scrt1Q99M85 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Scrt1Q99M85 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Scrt1Q99M85 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Scrt1Q99M85 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm9166-201ENSMUST00000120293 561 ntBASIC9.77□□□□□ -0.85
Scrt1Q99M85 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm24954-201ENSMUST00000178831 110 ntBASIC9.77□□□□□ -0.85
Scrt1Q99M85 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm9487-201ENSMUST00000216600 472 ntBASIC9.77□□□□□ -0.85
Scrt1Q99M85 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Mir326-201ENSMUST00000083637 95 ntBASIC9.77□□□□□ -0.85
Scrt1Q99M85 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms