Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gm13117-201ENSMUST00000120894 691 ntBASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gm15744-201ENSMUST00000161734 213 ntBASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Mir6407-201ENSMUST00000184510 101 ntBASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.46□□□□□ -0.57
Rprd1aQ8VDS4 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Rprd1aQ8VDS4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm12274-201ENSMUST00000120062 385 ntBASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm30946-201ENSMUST00000198288 724 ntBASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm45219-201ENSMUST00000205602 465 ntBASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rprd1aQ8VDS4 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rprd1aQ8VDS4 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms