Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Gm14571-201ENSMUST00000118292 570 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Gm6276-201ENSMUST00000120159 579 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Mir1893-201ENSMUST00000122565 83 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Gm36980-201ENSMUST00000195643 622 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Gm42867-201ENSMUST00000202995 469 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 CU025215.1-201ENSMUST00000222986 603 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 AC192333.3-201ENSMUST00000224041 463 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx54Q8K4L0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Mir705-201ENSMUST00000102058 82 ntBASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gm7781-201ENSMUST00000117258 788 ntBASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gm13002-201ENSMUST00000119286 682 ntBASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gm27675-201ENSMUST00000184527 94 ntBASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gm42859-201ENSMUST00000199572 193 ntBASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gm44173-201ENSMUST00000204316 132 ntBASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gm44236-201ENSMUST00000204492 513 ntBASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ddx54Q8K4L0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 CT571271.1-201ENSMUST00000227071 670 ntBASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx54Q8K4L0 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms