Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm11919-201ENSMUST00000117609 721 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm13827-201ENSMUST00000148801 372 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm28671-201ENSMUST00000187036 692 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm37860-201ENSMUST00000195380 1034 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm37197-201ENSMUST00000195607 401 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 AC156790.2-201ENSMUST00000227115 568 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm10580-201ENSMUST00000097985 396 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm10582-201ENSMUST00000097987 396 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm10583-201ENSMUST00000097988 396 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm38312-201ENSMUST00000195426 1746 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trim52Q8CDV4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Gm13094-201ENSMUST00000117930 409 ntBASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Gm15031-201ENSMUST00000121341 210 ntBASIC13.63□□□□□ -0.23
Trim52Q8CDV4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.63□□□□□ -0.23
Trim52Q8CDV4 AC121567.1-201ENSMUST00000227213 842 ntBASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Gm25125-201ENSMUST00000083340 136 ntBASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Gm25514-201ENSMUST00000083860 135 ntBASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim52Q8CDV4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim52Q8CDV4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms