Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Gm15432-201ENSMUST00000121106 195 ntBASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Gm8815-201ENSMUST00000173809 620 ntBASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Gm19353-201ENSMUST00000184561 445 ntBASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc87Q8CDL9 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ccdc87Q8CDL9 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc87Q8CDL9 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.77□□□□□ -0.52
Ccdc87Q8CDL9 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc87Q8CDL9 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc87Q8CDL9 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Gm5302-201ENSMUST00000202130 796 ntBASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc87Q8CDL9 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Gm13809-201ENSMUST00000117921 597 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Gm13263-201ENSMUST00000121271 838 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Gm37986-201ENSMUST00000193285 383 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Gm8959-201ENSMUST00000213150 571 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Ginm1-202ENSMUST00000065124 300 ntBASIC11.76□□□□□ -0.53
Ccdc87Q8CDL9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms