Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Alx1Q8C8B0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Alx1Q8C8B0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Alx1Q8C8B0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Alx1Q8C8B0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm11560-201ENSMUST00000117567 948 ntBASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm44216-201ENSMUST00000203942 157 ntBASIC12.89□□□□□ -0.35
Alx1Q8C8B0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.89□□□□□ -0.35
Alx1Q8C8B0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm25830-201ENSMUST00000158923 132 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm20781-201ENSMUST00000193154 693 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm21736-201ENSMUST00000195399 693 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm43097-201ENSMUST00000196867 151 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Gm26670-202ENSMUST00000226862 340 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx1Q8C8B0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms