Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.21□□□□□ -0.45
Trim9Q8C7M3 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim9Q8C7M3 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim9Q8C7M3 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trim9Q8C7M3 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.21□□□□□ -0.46
Trim9Q8C7M3 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim9Q8C7M3 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim9Q8C7M3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trim9Q8C7M3 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.21□□□□□ -0.46
Trim9Q8C7M3 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trim9Q8C7M3 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.21□□□□□ -0.46
Trim9Q8C7M3 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gm8959-201ENSMUST00000213150 571 ntBASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gm30671-201ENSMUST00000214898 318 ntBASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Id2-203ENSMUST00000222667 958 ntBASIC12.2□□□□□ -0.46
Trim9Q8C7M3 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim9Q8C7M3 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm25766-201ENSMUST00000104101 131 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm12663-201ENSMUST00000118481 958 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm3828-201ENSMUST00000121817 257 ntBASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim9Q8C7M3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms