Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Mir1896-201ENSMUST00000122641 81 ntBASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.94□□□□□ -0.34
Usp44Q8C2S0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.94□□□□□ -0.34
Usp44Q8C2S0 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp44Q8C2S0 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Gm13019-201ENSMUST00000120000 276 ntBASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Gm29410-201ENSMUST00000188383 694 ntBASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Gm5865-201ENSMUST00000198713 637 ntBASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp44Q8C2S0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp44Q8C2S0 Gm43671-201ENSMUST00000200422 433 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms