Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Platr10-202ENSMUST00000191479 818 ntBASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gm37301-201ENSMUST00000195412 568 ntBASIC11.42□□□□□ -0.58
Trub1Q8C0D0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trub1Q8C0D0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Gm27441-201ENSMUST00000185000 105 ntBASIC11.41□□□□□ -0.58
Trub1Q8C0D0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trub1Q8C0D0 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Gm7467-201ENSMUST00000185173 652 ntBASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Gm28746-201ENSMUST00000187453 380 ntBASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.4□□□□□ -0.58
Trub1Q8C0D0 Gm45118-201ENSMUST00000208928 825 ntBASIC11.4□□□□□ -0.58
Trub1Q8C0D0 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.4□□□□□ -0.58
Trub1Q8C0D0 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms