Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Mir6941-201ENSMUST00000184711 59 ntBASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm11380-201ENSMUST00000118067 560 ntBASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm15196-201ENSMUST00000121406 482 ntBASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Mir8091-201ENSMUST00000183602 139 ntBASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm20781-201ENSMUST00000193154 693 ntBASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm21736-201ENSMUST00000195399 693 ntBASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm18204-201ENSMUST00000209835 793 ntBASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh3rf2Q8BZT2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm23612-201ENSMUST00000103823 110 ntBASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm11996-201ENSMUST00000117538 915 ntBASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm23576-201ENSMUST00000179918 110 ntBASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm9162-201ENSMUST00000182081 991 ntBASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm5870-201ENSMUST00000196461 282 ntBASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm7880-201ENSMUST00000203748 871 ntBASIC11.23□□□□□ -0.61
Sh3rf2Q8BZT2 Gm43969-201ENSMUST00000204833 535 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms