Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm5070-201ENSMUST00000177599 862 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm3096-201ENSMUST00000185770 364 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm5982-201ENSMUST00000196234 512 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm43962-201ENSMUST00000203898 190 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm44008-201ENSMUST00000204345 412 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm19187-201ENSMUST00000206781 892 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm10608-202ENSMUST00000213924 676 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gzmn-202ENSMUST00000225535 989 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm5705-201ENSMUST00000066241 711 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smco3Q8BQM7 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Gm11573-201ENSMUST00000119956 394 ntBASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Mir8093-201ENSMUST00000185043 137 ntBASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Gm38158-201ENSMUST00000194617 339 ntBASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Gm43112-201ENSMUST00000196665 3122 ntBASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Smco3Q8BQM7 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Smco3Q8BQM7 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smco3Q8BQM7 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms