Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Snord17-201ENSMUST00000104526 238 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Gm22119-201ENSMUST00000175594 99 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Gm20781-201ENSMUST00000193154 693 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Gm21736-201ENSMUST00000195399 693 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Gm43547-201ENSMUST00000197729 328 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Gm43506-201ENSMUST00000200675 753 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Gm2448-201ENSMUST00000207080 559 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nod1Q8BHB0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm27956-201ENSMUST00000175604 260 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm19927-201ENSMUST00000185792 781 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm6606-201ENSMUST00000193613 947 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm19918-201ENSMUST00000194858 400 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm43002-201ENSMUST00000200310 155 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 BC080696-201ENSMUST00000202858 1218 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nod1Q8BHB0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nod1Q8BHB0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms