Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm11560-201ENSMUST00000117567 948 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm14497-201ENSMUST00000119537 580 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm5298-201ENSMUST00000201122 892 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm18042-201ENSMUST00000219887 790 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc88cQ6VGS5 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gm11578-201ENSMUST00000118530 459 ntBASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gm37723-201ENSMUST00000194480 565 ntBASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gm42430-201ENSMUST00000197209 616 ntBASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc88cQ6VGS5 Gm14165-201ENSMUST00000121456 952 ntBASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Gm5302-201ENSMUST00000202130 796 ntBASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Gm7589-201ENSMUST00000085631 534 ntBASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc88cQ6VGS5 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms