Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Spata33-207ENSMUST00000212760 4074 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm4294-201ENSMUST00000105169 614 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm8111-201ENSMUST00000117659 987 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm24990-201ENSMUST00000157406 323 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm25890-201ENSMUST00000177643 165 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm22614-201ENSMUST00000178300 165 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm4482-201ENSMUST00000200876 742 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm22042-201ENSMUST00000082989 165 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm26110-201ENSMUST00000083971 165 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Gm19246-201ENSMUST00000173599 255 ntBASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Gm28032-201ENSMUST00000184104 96 ntBASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scaf4Q6PFF0 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms