Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Chd4Q6PDQ2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Gm24470-201ENSMUST00000104486 132 ntBASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Gm5766-202ENSMUST00000161633 799 ntBASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Gm44236-201ENSMUST00000204492 513 ntBASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Gm45363-201ENSMUST00000210196 1294 ntBASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chd4Q6PDQ2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Gm27833-201ENSMUST00000184285 124 ntBASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 AC154461.1-201ENSMUST00000224207 1005 ntBASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 AC163638.2-201ENSMUST00000224920 827 ntBASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Gm25125-201ENSMUST00000083340 136 ntBASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chd4Q6PDQ2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Cog3-203ENSMUST00000227473 4197 ntBASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Gm22582-201ENSMUST00000102283 94 ntBASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Gm14231-201ENSMUST00000120090 592 ntBASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Gm5311-201ENSMUST00000203518 709 ntBASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Arhgef33-210ENSMUST00000225548 456 ntBASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Gm5424-201ENSMUST00000053865 1240 ntBASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 Gm6783-201ENSMUST00000120916 1437 ntBASIC14.21□□□□□ -0.14
Chd4Q6PDQ2 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Gm44388-201ENSMUST00000204350 258 ntBASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Gm18466-201ENSMUST00000209147 499 ntBASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 CT030035.1-201ENSMUST00000223964 935 ntBASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chd4Q6PDQ2 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms