Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clcn1Q64347 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Gm6158-201ENSMUST00000109467 904 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Gm12461-201ENSMUST00000120231 1239 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 Gm15196-201ENSMUST00000121406 482 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Gm26736-201ENSMUST00000180425 1236 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Trav11n-201ENSMUST00000200113 343 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 Gm18035-201ENSMUST00000211962 589 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 AC122024.3-201ENSMUST00000217719 294 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 AC162932.1-201ENSMUST00000219209 872 ntBASIC14.21□□□□□ -0.13
Clcn1Q64347 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clcn1Q64347 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Clcn1Q64347 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Clcn1Q64347 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clcn1Q64347 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Clcn1Q64347 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clcn1Q64347 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clcn1Q64347 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Clcn1Q64347 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm14234-201ENSMUST00000119539 845 ntBASIC14.2□□□□□ -0.14
Clcn1Q64347 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC14.2□□□□□ -0.14
Clcn1Q64347 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC14.2□□□□□ -0.14
Clcn1Q64347 AC154757.2-201ENSMUST00000228885 743 ntBASIC14.2□□□□□ -0.14
Clcn1Q64347 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clcn1Q64347 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Clcn1Q64347 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clcn1Q64347 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Clcn1Q64347 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Clcn1Q64347 Gm14005-210ENSMUST00000225087 1413 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.19□□□□□ -0.14
Clcn1Q64347 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.19□□□□□ -0.14
Clcn1Q64347 Gm13039-201ENSMUST00000118638 794 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Gm15617-201ENSMUST00000118973 771 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Gm13981-201ENSMUST00000122360 447 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Gm26272-201ENSMUST00000179241 132 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 AC173345.3-201ENSMUST00000221245 1093 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Lect2-202ENSMUST00000225183 823 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 CT025525.2-201ENSMUST00000227743 423 ntBASIC14.19□□□□□ -0.14
Clcn1Q64347 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clcn1Q64347 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms