Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Olfr584-201ENSMUST00000098210 964 ntBASIC12.24□□□□□ -0.45
Ift88Q61371 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ift88Q61371 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ift88Q61371 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ift88Q61371 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ift88Q61371 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ift88Q61371 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ift88Q61371 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ift88Q61371 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ift88Q61371 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.23□□□□□ -0.45
Ift88Q61371 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.23□□□□□ -0.45
Ift88Q61371 Gm11941-201ENSMUST00000119904 610 ntBASIC12.23□□□□□ -0.45
Ift88Q61371 Gm11450-201ENSMUST00000121144 333 ntBASIC12.23□□□□□ -0.45
Ift88Q61371 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Gm28746-201ENSMUST00000187453 380 ntBASIC12.23□□□□□ -0.45
Ift88Q61371 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.23□□□□□ -0.45
Ift88Q61371 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.23□□□□□ -0.45
Ift88Q61371 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.23□□□□□ -0.45
Ift88Q61371 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.23□□□□□ -0.45
Ift88Q61371 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ift88Q61371 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ift88Q61371 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.23□□□□□ -0.45
Ift88Q61371 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ift88Q61371 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ift88Q61371 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ift88Q61371 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ift88Q61371 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ift88Q61371 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ift88Q61371 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ift88Q61371 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ift88Q61371 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ift88Q61371 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm23061-201ENSMUST00000102348 116 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm14017-201ENSMUST00000121934 386 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Ift88Q61371 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm25226-201ENSMUST00000158198 123 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ift88Q61371 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm18367-201ENSMUST00000176139 600 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.22□□□□□ -0.45
Ift88Q61371 Gm43186-201ENSMUST00000198130 824 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 Gm5369-201ENSMUST00000217499 588 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 Gm9111-201ENSMUST00000219394 709 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.22□□□□□ -0.45
Ift88Q61371 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms