Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm28833-201ENSMUST00000189671 559 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm5302-201ENSMUST00000202130 796 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm19091-201ENSMUST00000208120 978 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm11380-201ENSMUST00000118067 560 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Mir6958-201ENSMUST00000184207 73 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Platr10-202ENSMUST00000191479 818 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm37365-201ENSMUST00000193109 409 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm18059-201ENSMUST00000208073 580 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm45120-201ENSMUST00000208880 408 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm8255-201ENSMUST00000218693 305 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.28□□□□□ -0.28
Vps54Q5SPW0 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps54Q5SPW0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Vps54Q5SPW0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps54Q5SPW0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vps54Q5SPW0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps54Q5SPW0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps54Q5SPW0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vps54Q5SPW0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Gm8723-201ENSMUST00000166076 820 ntBASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Gm8701-201ENSMUST00000169259 874 ntBASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps54Q5SPW0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Gm25053-201ENSMUST00000103982 133 ntBASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Gm25922-201ENSMUST00000104281 130 ntBASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Gm24679-201ENSMUST00000158762 111 ntBASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Mir7035-201ENSMUST00000184713 82 ntBASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Gm25053-202ENSMUST00000199731 132 ntBASIC13.26□□□□□ -0.29
Vps54Q5SPW0 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms