Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm12419-201ENSMUST00000116649 636 ntBASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm14263-201ENSMUST00000117955 746 ntBASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.8□□□□□ -0.52
Syne3Q4FZC9 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Syne3Q4FZC9 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm23272-201ENSMUST00000104053 129 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm16219-201ENSMUST00000120096 274 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm22846-201ENSMUST00000157706 270 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm17391-201ENSMUST00000171036 126 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Mir8115-201ENSMUST00000184992 119 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Syne3Q4FZC9 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.78□□□□□ -0.52
Syne3Q4FZC9 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Olfml3-204ENSMUST00000169286 874 ntBASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Gm17825-201ENSMUST00000206836 794 ntBASIC11.78□□□□□ -0.52
Syne3Q4FZC9 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Gm23105-201ENSMUST00000083719 134 ntBASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Syne3Q4FZC9 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms