Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm8210-201ENSMUST00000178557 483 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm15454-201ENSMUST00000179718 483 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm8982-201ENSMUST00000184198 1295 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm28677-202ENSMUST00000186904 615 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 AC165159.1-201ENSMUST00000223825 631 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm6344-201ENSMUST00000075962 483 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm42521-201ENSMUST00000199190 2040 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm14132-201ENSMUST00000117188 1719 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm5721-201ENSMUST00000119845 1696 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm12696-201ENSMUST00000122361 905 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm8813-201ENSMUST00000155930 595 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Mocs2-210ENSMUST00000183407 1074 ntTSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm39128-201ENSMUST00000208237 1094 ntTSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 4930473H19Rik-202ENSMUST00000222124 1000 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 AC124450.1-201ENSMUST00000225569 495 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm24556-201ENSMUST00000104547 130 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Apod-202ENSMUST00000115230 1070 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm22762-201ENSMUST00000157395 137 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm16585-201ENSMUST00000161442 610 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm16350-201ENSMUST00000162958 446 ntTSL 2 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 AC158531.1-201ENSMUST00000224617 457 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 AC163638.1-201ENSMUST00000224818 392 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 AC140244.1-201ENSMUST00000228454 229 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm45204-201ENSMUST00000206297 1354 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 4933402D24Rik-201ENSMUST00000027102 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Eef1g-201ENSMUST00000052248 1864 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 AC155245.1-201ENSMUST00000222266 1804 ntBASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ush2AQ2QI47 Snhg17-208ENSMUST00000154242 346 ntTSL 3 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 1810021B22Rik-205ENSMUST00000162579 544 ntTSL 2 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Ciao1-205ENSMUST00000174863 531 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm42871-201ENSMUST00000199333 315 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm44252-201ENSMUST00000204187 330 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm18060-201ENSMUST00000207407 564 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms